Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm29755-201ENSMUST00000196976 948 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm18730-201ENSMUST00000218038 343 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm4803-201ENSMUST00000218729 1279 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Ly6c1P0CW02 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm7857-201ENSMUST00000117957 358 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm12788-201ENSMUST00000119090 308 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm15610-201ENSMUST00000120584 195 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm11834-201ENSMUST00000122257 585 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm16147-201ENSMUST00000162143 373 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm29036-201ENSMUST00000189967 877 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Rps4l-202ENSMUST00000204242 789 ntBASIC10.04□□□□□ -0.8
Ly6c1P0CW02 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ly6c1P0CW02 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms