Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pdlim1O70400 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm11960-201ENSMUST00000122068 925 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm25732-201ENSMUST00000175168 60 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Mir8093-201ENSMUST00000185043 137 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm5733-201ENSMUST00000190232 939 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm45575-201ENSMUST00000210283 548 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Gm7940-201ENSMUST00000218195 769 ntBASIC11.67□□□□□ -0.54
Pdlim1O70400 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim1O70400 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim1O70400 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pdlim1O70400 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm13263-201ENSMUST00000121271 838 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm5982-201ENSMUST00000196234 512 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim1O70400 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.66□□□□□ -0.54
Pdlim1O70400 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim1O70400 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms