Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Gm38314-201ENSMUST00000195709 625 ntBASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Gm19640-201ENSMUST00000214849 464 ntBASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
B020004C17RikJ3QP07 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm7541-201ENSMUST00000118361 535 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm14234-201ENSMUST00000119539 845 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm11354-201ENSMUST00000121974 422 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm16030-201ENSMUST00000159098 603 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm24809-201ENSMUST00000175318 271 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
B020004C17RikJ3QP07 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Mir453-201ENSMUST00000104732 82 ntBASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Gm21778-201ENSMUST00000178779 471 ntBASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Mir7051-201ENSMUST00000184167 73 ntBASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Gm27390-201ENSMUST00000184516 176 ntBASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
B020004C17RikJ3QP07 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms