Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5538W4VSP6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5538W4VSP6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.02■□□□□ 0.96
Gm5538W4VSP6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5538W4VSP6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5538W4VSP6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5538W4VSP6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm5538W4VSP6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.01■□□□□ 0.95
Gm5538W4VSP6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5538W4VSP6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21■□□□□ 0.95
Gm5538W4VSP6 Gm14117-201ENSMUST00000122417 843 ntBASIC21■□□□□ 0.95
Gm5538W4VSP6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5538W4VSP6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5538W4VSP6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5538W4VSP6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5538W4VSP6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Gm5538W4VSP6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5538W4VSP6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5538W4VSP6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5538W4VSP6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5538W4VSP6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5538W4VSP6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5538W4VSP6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5538W4VSP6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Gm45102-201ENSMUST00000207427 857 ntBASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5538W4VSP6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5538W4VSP6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Gm5538W4VSP6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gm5538W4VSP6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Rps24-207ENSMUST00000224568 714 ntBASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm5538W4VSP6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5538W4VSP6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms