Protein–RNA interactions for Protein: Q9Z2D7

Mbd4, Methyl-CpG-binding domain protein 4, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd4Q9Z2D7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Mbd4Q9Z2D7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mbd4Q9Z2D7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd4Q9Z2D7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Mbd4Q9Z2D7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd4Q9Z2D7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd4Q9Z2D7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd4Q9Z2D7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd4Q9Z2D7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Mbd4Q9Z2D7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Mbd4Q9Z2D7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mbd4Q9Z2D7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.88■□□□□ 0.77
Mbd4Q9Z2D7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd4Q9Z2D7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Mbd4Q9Z2D7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mbd4Q9Z2D7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd4Q9Z2D7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms