Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gm5812-201ENSMUST00000061073 957 ntBASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn6Q9Z262 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn6Q9Z262 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn6Q9Z262 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn6Q9Z262 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cldn6Q9Z262 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn6Q9Z262 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.27■□□□□ 0.68
Cldn6Q9Z262 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldn6Q9Z262 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldn6Q9Z262 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.26■□□□□ 0.67
Cldn6Q9Z262 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn6Q9Z262 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn6Q9Z262 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Gm40881-201ENSMUST00000223397 166 ntBASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn6Q9Z262 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn6Q9Z262 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn6Q9Z262 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn6Q9Z262 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
Cldn6Q9Z262 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn6Q9Z262 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Cldn6Q9Z262 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn6Q9Z262 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Gm15546-201ENSMUST00000122095 826 ntBASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn6Q9Z262 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn6Q9Z262 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms