Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Nr1h3Q9Z0Y9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nr1h3Q9Z0Y9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Nr1h3Q9Z0Y9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nr1h3Q9Z0Y9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.32■■□□□ 1.16
Nr1h3Q9Z0Y9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1h3Q9Z0Y9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm6139-201ENSMUST00000079261 882 ntBASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.31■■□□□ 1.16
Nr1h3Q9Z0Y9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm7143-201ENSMUST00000222811 859 ntBASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.3■■□□□ 1.16
Nr1h3Q9Z0Y9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nr1h3Q9Z0Y9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nr1h3Q9Z0Y9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Mir7075-201ENSMUST00000184187 82 ntBASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.27■■□□□ 1.16
Nr1h3Q9Z0Y9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Nr1h3Q9Z0Y9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nr1h3Q9Z0Y9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nr1h3Q9Z0Y9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nr1h3Q9Z0Y9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nr1h3Q9Z0Y9 Gm8495-201ENSMUST00000188740 694 ntBASIC22.22■■□□□ 1.15
Nr1h3Q9Z0Y9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.22■■□□□ 1.15
Nr1h3Q9Z0Y9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.22■■□□□ 1.15
Nr1h3Q9Z0Y9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Nr1h3Q9Z0Y9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.22■■□□□ 1.15
Nr1h3Q9Z0Y9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms