Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn3Q9Z0G9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn3Q9Z0G9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn3Q9Z0G9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.78■□□□□ 0.92
Cldn3Q9Z0G9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn3Q9Z0G9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn3Q9Z0G9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn3Q9Z0G9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Cldn3Q9Z0G9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn3Q9Z0G9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn3Q9Z0G9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn3Q9Z0G9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn3Q9Z0G9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn3Q9Z0G9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn3Q9Z0G9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Gm14117-201ENSMUST00000122417 843 ntBASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn3Q9Z0G9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn3Q9Z0G9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn3Q9Z0G9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn3Q9Z0G9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn3Q9Z0G9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cldn3Q9Z0G9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Cldn3Q9Z0G9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cldn3Q9Z0G9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn3Q9Z0G9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn3Q9Z0G9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms