Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn8aQ9WTU3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn8aQ9WTU3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn8aQ9WTU3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn8aQ9WTU3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn8aQ9WTU3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Scn8aQ9WTU3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn8aQ9WTU3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn8aQ9WTU3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn8aQ9WTU3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn8aQ9WTU3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Scn8aQ9WTU3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn8aQ9WTU3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn8aQ9WTU3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn8aQ9WTU3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn8aQ9WTU3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn8aQ9WTU3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn8aQ9WTU3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn8aQ9WTU3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn8aQ9WTU3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.88■□□□□ 0.93
Scn8aQ9WTU3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.88■□□□□ 0.93
Scn8aQ9WTU3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn8aQ9WTU3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn8aQ9WTU3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.88■□□□□ 0.93
Scn8aQ9WTU3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.88■□□□□ 0.93
Scn8aQ9WTU3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn8aQ9WTU3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn8aQ9WTU3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.85■□□□□ 0.93
Scn8aQ9WTU3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms