Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.59■■□□□ 1.05
Scn5aQ9JJV9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.59■■□□□ 1.05
Scn5aQ9JJV9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.59■■□□□ 1.05
Scn5aQ9JJV9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn5aQ9JJV9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn5aQ9JJV9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn5aQ9JJV9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Scn5aQ9JJV9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scn5aQ9JJV9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn5aQ9JJV9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scn5aQ9JJV9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.57■■□□□ 1.04
Scn5aQ9JJV9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn5aQ9JJV9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn5aQ9JJV9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn5aQ9JJV9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Scn5aQ9JJV9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn5aQ9JJV9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn5aQ9JJV9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn5aQ9JJV9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn5aQ9JJV9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn5aQ9JJV9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn5aQ9JJV9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn5aQ9JJV9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.54■■□□□ 1.04
Scn5aQ9JJV9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn5aQ9JJV9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 Gm7291-201ENSMUST00000199147 382 ntBASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.53■■□□□ 1.04
Scn5aQ9JJV9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn5aQ9JJV9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.52■■□□□ 1.04
Scn5aQ9JJV9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.52■■□□□ 1.04
Scn5aQ9JJV9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn5aQ9JJV9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.52■■□□□ 1.04
Scn5aQ9JJV9 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.51■■□□□ 1.03
Scn5aQ9JJV9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn5aQ9JJV9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn5aQ9JJV9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Gm43060-201ENSMUST00000200621 289 ntBASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn5aQ9JJV9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn5aQ9JJV9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn5aQ9JJV9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Scn5aQ9JJV9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn5aQ9JJV9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn5aQ9JJV9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn5aQ9JJV9 Gm10849-201ENSMUST00000100397 618 ntBASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms