Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.97■□□□□ 0.47
Lime1Q9EQR5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lime1Q9EQR5 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lime1Q9EQR5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lime1Q9EQR5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Lime1Q9EQR5 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.94■□□□□ 0.46
Lime1Q9EQR5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lime1Q9EQR5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lime1Q9EQR5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.92■□□□□ 0.46
Lime1Q9EQR5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lime1Q9EQR5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.91■□□□□ 0.46
Lime1Q9EQR5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lime1Q9EQR5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.9■□□□□ 0.46
Lime1Q9EQR5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Golph3-202ENSMUST00000226517 2359 ntBASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lime1Q9EQR5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lime1Q9EQR5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms