Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Nif3l1Q9EQ80 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nif3l1Q9EQ80 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nif3l1Q9EQ80 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nif3l1Q9EQ80 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nif3l1Q9EQ80 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nif3l1Q9EQ80 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Gm45102-201ENSMUST00000207427 857 ntBASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nif3l1Q9EQ80 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nif3l1Q9EQ80 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nif3l1Q9EQ80 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nif3l1Q9EQ80 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nif3l1Q9EQ80 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nif3l1Q9EQ80 Gm14117-201ENSMUST00000122417 843 ntBASIC20.39■□□□□ 0.85
Nif3l1Q9EQ80 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nif3l1Q9EQ80 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nif3l1Q9EQ80 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nif3l1Q9EQ80 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nif3l1Q9EQ80 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nif3l1Q9EQ80 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nif3l1Q9EQ80 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.37■□□□□ 0.85
Nif3l1Q9EQ80 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nif3l1Q9EQ80 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nif3l1Q9EQ80 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nif3l1Q9EQ80 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nif3l1Q9EQ80 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nif3l1Q9EQ80 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nif3l1Q9EQ80 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nif3l1Q9EQ80 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nif3l1Q9EQ80 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nif3l1Q9EQ80 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nif3l1Q9EQ80 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nif3l1Q9EQ80 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nif3l1Q9EQ80 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nif3l1Q9EQ80 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nif3l1Q9EQ80 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.33■□□□□ 0.84
Nif3l1Q9EQ80 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms