Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Gm7417-201ENSMUST00000192950 473 ntBASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snrnp48Q9D361 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snrnp48Q9D361 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.52■□□□□ 0.88
Snrnp48Q9D361 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Snrnp48Q9D361 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Snrnp48Q9D361 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp48Q9D361 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp48Q9D361 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snrnp48Q9D361 Etf1-202ENSMUST00000180351 108 ntBASIC20.49■□□□□ 0.87
Snrnp48Q9D361 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Snrnp48Q9D361 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Snrnp48Q9D361 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Snrnp48Q9D361 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
Snrnp48Q9D361 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.48■□□□□ 0.87
Snrnp48Q9D361 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Gm9959-201ENSMUST00000068277 390 ntBASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp48Q9D361 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Gm45102-201ENSMUST00000207427 857 ntBASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snrnp48Q9D361 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snrnp48Q9D361 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snrnp48Q9D361 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Gm7143-201ENSMUST00000222811 859 ntBASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snrnp48Q9D361 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.45■□□□□ 0.86
Snrnp48Q9D361 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snrnp48Q9D361 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snrnp48Q9D361 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Snrnp48Q9D361 Rps24-207ENSMUST00000224568 714 ntBASIC20.43■□□□□ 0.86
Snrnp48Q9D361 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snrnp48Q9D361 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snrnp48Q9D361 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snrnp48Q9D361 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.42■□□□□ 0.86
Snrnp48Q9D361 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snrnp48Q9D361 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.42■□□□□ 0.86
Snrnp48Q9D361 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms