Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Upk1aQ9D132 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Upk1aQ9D132 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Gm14523-201ENSMUST00000117260 558 ntBASIC19.54■□□□□ 0.72
Upk1aQ9D132 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Upk1aQ9D132 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk1aQ9D132 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.52■□□□□ 0.72
Upk1aQ9D132 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Upk1aQ9D132 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.52■□□□□ 0.71
Upk1aQ9D132 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Upk1aQ9D132 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.51■□□□□ 0.71
Upk1aQ9D132 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk1aQ9D132 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.5■□□□□ 0.71
Upk1aQ9D132 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk1aQ9D132 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk1aQ9D132 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk1aQ9D132 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.49■□□□□ 0.71
Upk1aQ9D132 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk1aQ9D132 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk1aQ9D132 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.47■□□□□ 0.71
Upk1aQ9D132 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Upk1aQ9D132 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Gm7332-201ENSMUST00000118351 454 ntBASIC19.46■□□□□ 0.71
Upk1aQ9D132 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms