Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lysmd1Q9D0E3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lysmd1Q9D0E3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd1Q9D0E3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lysmd1Q9D0E3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Lysmd1Q9D0E3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lysmd1Q9D0E3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lysmd1Q9D0E3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Gm13234-201ENSMUST00000120010 747 ntBASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Gm7514-201ENSMUST00000209475 934 ntBASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.63■■□□□ 1.21
Lysmd1Q9D0E3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Lysmd1Q9D0E3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lysmd1Q9D0E3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.61■■□□□ 1.21
Lysmd1Q9D0E3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.61■■□□□ 1.21
Lysmd1Q9D0E3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Lysmd1Q9D0E3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lysmd1Q9D0E3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lysmd1Q9D0E3 Gm11421-201ENSMUST00000122124 294 ntBASIC22.6■■□□□ 1.21
Lysmd1Q9D0E3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.6■■□□□ 1.21
Lysmd1Q9D0E3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Lysmd1Q9D0E3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
Lysmd1Q9D0E3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Lysmd1Q9D0E3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lysmd1Q9D0E3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd1Q9D0E3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.56■■□□□ 1.2
Lysmd1Q9D0E3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.56■■□□□ 1.2
Lysmd1Q9D0E3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lysmd1Q9D0E3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lysmd1Q9D0E3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lysmd1Q9D0E3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.55■■□□□ 1.2
Lysmd1Q9D0E3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.55■■□□□ 1.2
Lysmd1Q9D0E3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lysmd1Q9D0E3 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.55■■□□□ 1.2
Lysmd1Q9D0E3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lysmd1Q9D0E3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Gm20049-201ENSMUST00000219950 730 ntBASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.54■■□□□ 1.2
Lysmd1Q9D0E3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lysmd1Q9D0E3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Lysmd1Q9D0E3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lysmd1Q9D0E3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.53■■□□□ 1.2
Lysmd1Q9D0E3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lysmd1Q9D0E3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Gm5408-201ENSMUST00000197998 747 ntBASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Lysmd1Q9D0E3 Reep4-203ENSMUST00000226563 1444 ntBASIC22.51■■□□□ 1.19
Lysmd1Q9D0E3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lysmd1Q9D0E3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lysmd1Q9D0E3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lysmd1Q9D0E3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lysmd1Q9D0E3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.51■■□□□ 1.19
Lysmd1Q9D0E3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.5■■□□□ 1.19
Lysmd1Q9D0E3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lysmd1Q9D0E3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms