Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Gm11687-201ENSMUST00000118911 886 ntBASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim13Q9CYB0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim13Q9CYB0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim13Q9CYB0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim13Q9CYB0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim13Q9CYB0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim13Q9CYB0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim13Q9CYB0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Mir6538-201ENSMUST00000183713 110 ntBASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim13Q9CYB0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms