Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pfdn1Q9CWM4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pfdn1Q9CWM4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.04■□□□□ 0.48
Pfdn1Q9CWM4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Gm8109-201ENSMUST00000194076 746 ntBASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pfdn1Q9CWM4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pfdn1Q9CWM4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pfdn1Q9CWM4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Pfdn1Q9CWM4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pfdn1Q9CWM4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pfdn1Q9CWM4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pfdn1Q9CWM4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Pfdn1Q9CWM4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pfdn1Q9CWM4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pfdn1Q9CWM4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pfdn1Q9CWM4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pfdn1Q9CWM4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Gm24804-201ENSMUST00000174982 85 ntBASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pfdn1Q9CWM4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pfdn1Q9CWM4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pfdn1Q9CWM4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms