Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Gm6311-201ENSMUST00000073790 878 ntBASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cotl1Q9CQI6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cotl1Q9CQI6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cotl1Q9CQI6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Cotl1Q9CQI6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cotl1Q9CQI6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cotl1Q9CQI6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.87■□□□□ 0.13
Cotl1Q9CQI6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Gm22567-201ENSMUST00000175542 342 ntBASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cotl1Q9CQI6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cotl1Q9CQI6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cotl1Q9CQI6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cotl1Q9CQI6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Cotl1Q9CQI6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms