Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trem2Q99NH8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trem2Q99NH8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trem2Q99NH8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trem2Q99NH8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trem2Q99NH8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trem2Q99NH8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trem2Q99NH8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trem2Q99NH8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21■□□□□ 0.95
Trem2Q99NH8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21■□□□□ 0.95
Trem2Q99NH8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trem2Q99NH8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trem2Q99NH8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trem2Q99NH8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trem2Q99NH8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trem2Q99NH8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trem2Q99NH8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.99■□□□□ 0.95
Trem2Q99NH8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trem2Q99NH8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.98■□□□□ 0.95
Trem2Q99NH8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trem2Q99NH8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.97■□□□□ 0.95
Trem2Q99NH8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.97■□□□□ 0.95
Trem2Q99NH8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.97■□□□□ 0.95
Trem2Q99NH8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trem2Q99NH8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trem2Q99NH8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trem2Q99NH8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trem2Q99NH8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trem2Q99NH8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.96■□□□□ 0.95
Trem2Q99NH8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trem2Q99NH8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trem2Q99NH8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.94■□□□□ 0.94
Trem2Q99NH8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trem2Q99NH8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.92■□□□□ 0.94
Trem2Q99NH8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trem2Q99NH8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trem2Q99NH8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trem2Q99NH8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trem2Q99NH8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trem2Q99NH8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.91■□□□□ 0.94
Trem2Q99NH8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.91■□□□□ 0.94
Trem2Q99NH8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trem2Q99NH8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trem2Q99NH8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms