Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd2Q99JR8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd2Q99JR8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Smarcd2Q99JR8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd2Q99JR8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd2Q99JR8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Spcs1-204ENSMUST00000226782 949 ntBASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd2Q99JR8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd2Q99JR8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd2Q99JR8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd2Q99JR8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd2Q99JR8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Smarcd2Q99JR8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd2Q99JR8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd2Q99JR8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd2Q99JR8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd2Q99JR8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.92■□□□□ 0.94
Smarcd2Q99JR8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd2Q99JR8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.92■□□□□ 0.94
Smarcd2Q99JR8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcd2Q99JR8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcd2Q99JR8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
Smarcd2Q99JR8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Smarcd2Q99JR8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
Smarcd2Q99JR8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd2Q99JR8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.88■□□□□ 0.93
Smarcd2Q99JR8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smarcd2Q99JR8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.88■□□□□ 0.93
Smarcd2Q99JR8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Smarcd2Q99JR8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.88■□□□□ 0.93
Smarcd2Q99JR8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd2Q99JR8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd2Q99JR8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.85■□□□□ 0.93
Smarcd2Q99JR8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd2Q99JR8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd2Q99JR8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd2Q99JR8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd2Q99JR8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd2Q99JR8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd2Q99JR8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd2Q99JR8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd2Q99JR8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd2Q99JR8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd2Q99JR8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.83■□□□□ 0.93
Smarcd2Q99JR8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd2Q99JR8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd2Q99JR8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcd2Q99JR8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcd2Q99JR8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Gm10493-201ENSMUST00000097270 612 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms