Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhb3Q91XZ7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb3Q91XZ7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb3Q91XZ7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhb3Q91XZ7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb3Q91XZ7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb3Q91XZ7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb3Q91XZ7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb3Q91XZ7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb3Q91XZ7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb3Q91XZ7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.31■□□□□ 0.84
Pcdhb3Q91XZ7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb3Q91XZ7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Pcdhb3Q91XZ7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb3Q91XZ7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb3Q91XZ7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb3Q91XZ7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdhb3Q91XZ7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb3Q91XZ7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb3Q91XZ7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb3Q91XZ7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb3Q91XZ7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb3Q91XZ7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb3Q91XZ7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.26■□□□□ 0.83
Pcdhb3Q91XZ7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb3Q91XZ7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb3Q91XZ7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhb3Q91XZ7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb3Q91XZ7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms