Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb17Q91VD8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb17Q91VD8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb17Q91VD8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb17Q91VD8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb17Q91VD8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.27■■□□□ 1
Pcdhb17Q91VD8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb17Q91VD8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Pcdhb17Q91VD8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Pcdhb17Q91VD8 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.27■□□□□ 0.99
Pcdhb17Q91VD8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb17Q91VD8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb17Q91VD8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb17Q91VD8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb17Q91VD8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.25■□□□□ 0.99
Pcdhb17Q91VD8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb17Q91VD8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb17Q91VD8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb17Q91VD8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb17Q91VD8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb17Q91VD8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb17Q91VD8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb17Q91VD8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
Pcdhb17Q91VD8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb17Q91VD8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb17Q91VD8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.2■□□□□ 0.98
Pcdhb17Q91VD8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb17Q91VD8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb17Q91VD8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Gm12922-201ENSMUST00000120626 809 ntBASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb17Q91VD8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb17Q91VD8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pcdhb17Q91VD8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhb17Q91VD8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb17Q91VD8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb17Q91VD8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb17Q91VD8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb17Q91VD8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb17Q91VD8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb17Q91VD8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhb17Q91VD8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb17Q91VD8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb17Q91VD8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb17Q91VD8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb17Q91VD8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.14■□□□□ 0.97
Pcdhb17Q91VD8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms