Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nle1Q8VEJ4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nle1Q8VEJ4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Nle1Q8VEJ4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.33■■□□□ 1.01
Nle1Q8VEJ4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Nle1Q8VEJ4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nle1Q8VEJ4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Nle1Q8VEJ4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nle1Q8VEJ4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Nle1Q8VEJ4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nle1Q8VEJ4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nle1Q8VEJ4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nle1Q8VEJ4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 Gm27454-201ENSMUST00000185090 204 ntBASIC21.3■■□□□ 1
Nle1Q8VEJ4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nle1Q8VEJ4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.29■■□□□ 1
Nle1Q8VEJ4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.28■■□□□ 1
Nle1Q8VEJ4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nle1Q8VEJ4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nle1Q8VEJ4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Nle1Q8VEJ4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nle1Q8VEJ4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nle1Q8VEJ4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nle1Q8VEJ4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Nle1Q8VEJ4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Nle1Q8VEJ4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Gm43530-201ENSMUST00000195920 274 ntBASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nle1Q8VEJ4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nle1Q8VEJ4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nle1Q8VEJ4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nle1Q8VEJ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms