Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx39aQ8VDW0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx39aQ8VDW0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx39aQ8VDW0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx39aQ8VDW0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx39aQ8VDW0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
Ddx39aQ8VDW0 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.87■■□□□ 1.25
Ddx39aQ8VDW0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Ddx39aQ8VDW0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx39aQ8VDW0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.87■■□□□ 1.25
Ddx39aQ8VDW0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
Ddx39aQ8VDW0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx39aQ8VDW0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Ddx39aQ8VDW0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx39aQ8VDW0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ddx39aQ8VDW0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx39aQ8VDW0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx39aQ8VDW0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx39aQ8VDW0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Ddx39aQ8VDW0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx39aQ8VDW0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.82■■□□□ 1.24
Ddx39aQ8VDW0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx39aQ8VDW0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx39aQ8VDW0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx39aQ8VDW0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Ddx39aQ8VDW0 Mir7075-201ENSMUST00000184187 82 ntBASIC22.8■■□□□ 1.24
Ddx39aQ8VDW0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx39aQ8VDW0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx39aQ8VDW0 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.79■■□□□ 1.24
Ddx39aQ8VDW0 Gm6139-201ENSMUST00000079261 882 ntBASIC22.79■■□□□ 1.24
Ddx39aQ8VDW0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx39aQ8VDW0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx39aQ8VDW0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.78■■□□□ 1.24
Ddx39aQ8VDW0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
Ddx39aQ8VDW0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx39aQ8VDW0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.77■■□□□ 1.24
Ddx39aQ8VDW0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx39aQ8VDW0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx39aQ8VDW0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx39aQ8VDW0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.76■■□□□ 1.23
Ddx39aQ8VDW0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx39aQ8VDW0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx39aQ8VDW0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx39aQ8VDW0 Gm43530-201ENSMUST00000195920 274 ntBASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms