Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Gm27405-201ENSMUST00000184201 112 ntBASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdpf1Q8R3A2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Gm12251-201ENSMUST00000117893 792 ntBASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Gm26571-201ENSMUST00000181399 666 ntBASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdpf1Q8R3A2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Gm26833-201ENSMUST00000180899 440 ntBASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cdpf1Q8R3A2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdpf1Q8R3A2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdpf1Q8R3A2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdpf1Q8R3A2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.04■□□□□ 0.32
Cdpf1Q8R3A2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdpf1Q8R3A2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdpf1Q8R3A2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdpf1Q8R3A2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdpf1Q8R3A2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Gm43060-201ENSMUST00000200621 289 ntBASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Gm7143-201ENSMUST00000222811 859 ntBASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdpf1Q8R3A2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Gm42642-201ENSMUST00000200683 355 ntBASIC17■□□□□ 0.31
Cdpf1Q8R3A2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdpf1Q8R3A2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.99■□□□□ 0.31
Cdpf1Q8R3A2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms