Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Gm13241-201ENSMUST00000094493 780 ntBASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tm6sf2Q8R1J1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm6sf2Q8R1J1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Gm7143-201ENSMUST00000222811 859 ntBASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Golgb1-201ENSMUST00000023534 498 ntBASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.28■□□□□ 0.68
Tm6sf2Q8R1J1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Tm6sf2Q8R1J1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tm6sf2Q8R1J1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tm6sf2Q8R1J1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Tm6sf2Q8R1J1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.27■□□□□ 0.68
Tm6sf2Q8R1J1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tm6sf2Q8R1J1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tm6sf2Q8R1J1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tm6sf2Q8R1J1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.26■□□□□ 0.67
Tm6sf2Q8R1J1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tm6sf2Q8R1J1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tm6sf2Q8R1J1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tm6sf2Q8R1J1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tm6sf2Q8R1J1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tm6sf2Q8R1J1 Gm21956-201ENSMUST00000179946 522 ntBASIC19.23■□□□□ 0.67
Tm6sf2Q8R1J1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tm6sf2Q8R1J1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tm6sf2Q8R1J1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms