Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Clip4Q8CI96 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip4Q8CI96 Gm14117-201ENSMUST00000122417 843 ntBASIC20.58■□□□□ 0.89
Clip4Q8CI96 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.58■□□□□ 0.89
Clip4Q8CI96 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip4Q8CI96 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip4Q8CI96 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Clip4Q8CI96 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip4Q8CI96 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip4Q8CI96 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.57■□□□□ 0.88
Clip4Q8CI96 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip4Q8CI96 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip4Q8CI96 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.57■□□□□ 0.88
Clip4Q8CI96 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip4Q8CI96 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip4Q8CI96 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.57■□□□□ 0.88
Clip4Q8CI96 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip4Q8CI96 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.56■□□□□ 0.88
Clip4Q8CI96 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip4Q8CI96 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clip4Q8CI96 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Clip4Q8CI96 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip4Q8CI96 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip4Q8CI96 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip4Q8CI96 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.55■□□□□ 0.88
Clip4Q8CI96 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip4Q8CI96 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Etf1-202ENSMUST00000180351 108 ntBASIC20.54■□□□□ 0.88
Clip4Q8CI96 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clip4Q8CI96 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clip4Q8CI96 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.53■□□□□ 0.88
Clip4Q8CI96 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.53■□□□□ 0.88
Clip4Q8CI96 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.53■□□□□ 0.88
Clip4Q8CI96 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip4Q8CI96 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Clip4Q8CI96 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.52■□□□□ 0.88
Clip4Q8CI96 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip4Q8CI96 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip4Q8CI96 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Iqck-206ENSMUST00000208658 2891 ntBASIC20.51■□□□□ 0.87
Clip4Q8CI96 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip4Q8CI96 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clip4Q8CI96 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clip4Q8CI96 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clip4Q8CI96 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clip4Q8CI96 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clip4Q8CI96 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clip4Q8CI96 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.5■□□□□ 0.87
Clip4Q8CI96 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Clip4Q8CI96 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clip4Q8CI96 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clip4Q8CI96 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clip4Q8CI96 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clip4Q8CI96 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clip4Q8CI96 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clip4Q8CI96 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Gm10399-202ENSMUST00000202768 748 ntBASIC20.48■□□□□ 0.87
Clip4Q8CI96 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clip4Q8CI96 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms