Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.68■■□□□ 1.06
Uba3Q8C878 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uba3Q8C878 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Uba3Q8C878 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Uba3Q8C878 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Uba3Q8C878 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.66■■□□□ 1.06
Uba3Q8C878 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Uba3Q8C878 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uba3Q8C878 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Uba3Q8C878 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Uba3Q8C878 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uba3Q8C878 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uba3Q8C878 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Uba3Q8C878 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uba3Q8C878 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.65■■□□□ 1.06
Uba3Q8C878 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Uba3Q8C878 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Uba3Q8C878 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uba3Q8C878 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uba3Q8C878 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.05
Uba3Q8C878 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Uba3Q8C878 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uba3Q8C878 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uba3Q8C878 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Uba3Q8C878 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Uba3Q8C878 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uba3Q8C878 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uba3Q8C878 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.62■■□□□ 1.05
Uba3Q8C878 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.62■■□□□ 1.05
Uba3Q8C878 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.62■■□□□ 1.05
Uba3Q8C878 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uba3Q8C878 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uba3Q8C878 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.61■■□□□ 1.05
Uba3Q8C878 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Uba3Q8C878 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.61■■□□□ 1.05
Uba3Q8C878 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uba3Q8C878 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uba3Q8C878 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.6■■□□□ 1.05
Uba3Q8C878 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uba3Q8C878 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uba3Q8C878 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Uba3Q8C878 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uba3Q8C878 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uba3Q8C878 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
Uba3Q8C878 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.59■■□□□ 1.05
Uba3Q8C878 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.59■■□□□ 1.05
Uba3Q8C878 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Uba3Q8C878 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uba3Q8C878 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uba3Q8C878 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Uba3Q8C878 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uba3Q8C878 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.58■■□□□ 1.05
Uba3Q8C878 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uba3Q8C878 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uba3Q8C878 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Uba3Q8C878 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Uba3Q8C878 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Uba3Q8C878 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Uba3Q8C878 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Uba3Q8C878 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Uba3Q8C878 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Uba3Q8C878 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Uba3Q8C878 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Uba3Q8C878 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uba3Q8C878 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Uba3Q8C878 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.57■■□□□ 1.04
Uba3Q8C878 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uba3Q8C878 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uba3Q8C878 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uba3Q8C878 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uba3Q8C878 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.56■■□□□ 1.04
Uba3Q8C878 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uba3Q8C878 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uba3Q8C878 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uba3Q8C878 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uba3Q8C878 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uba3Q8C878 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uba3Q8C878 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.55■■□□□ 1.04
Uba3Q8C878 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.55■■□□□ 1.04
Uba3Q8C878 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Uba3Q8C878 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uba3Q8C878 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uba3Q8C878 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.54■■□□□ 1.04
Uba3Q8C878 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uba3Q8C878 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms