Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.29■■□□□ 1.8
Ccdc60Q8C4J0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc60Q8C4J0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc60Q8C4J0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc60Q8C4J0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Ccdc60Q8C4J0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Ccdc60Q8C4J0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC26.27■■□□□ 1.8
Ccdc60Q8C4J0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc60Q8C4J0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc60Q8C4J0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc60Q8C4J0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc60Q8C4J0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.26■■□□□ 1.79
Ccdc60Q8C4J0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc60Q8C4J0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc60Q8C4J0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.23■■□□□ 1.79
Ccdc60Q8C4J0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ccdc60Q8C4J0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ccdc60Q8C4J0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ccdc60Q8C4J0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ccdc60Q8C4J0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ccdc60Q8C4J0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ccdc60Q8C4J0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ccdc60Q8C4J0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ccdc60Q8C4J0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ccdc60Q8C4J0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.2■■□□□ 1.78
Ccdc60Q8C4J0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ccdc60Q8C4J0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Gm7143-201ENSMUST00000222811 859 ntBASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc60Q8C4J0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.18■■□□□ 1.78
Ccdc60Q8C4J0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.18■■□□□ 1.78
Ccdc60Q8C4J0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ccdc60Q8C4J0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
Ccdc60Q8C4J0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ccdc60Q8C4J0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc60Q8C4J0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc60Q8C4J0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc60Q8C4J0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc60Q8C4J0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Gm9870-201ENSMUST00000063874 645 ntBASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc60Q8C4J0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc60Q8C4J0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc60Q8C4J0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc60Q8C4J0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
Ccdc60Q8C4J0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Ccdc60Q8C4J0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC26.14■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms