Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Eri3Q8C460 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Eri3Q8C460 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Eri3Q8C460 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Eri3Q8C460 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Eri3Q8C460 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Eri3Q8C460 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Eri3Q8C460 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.54■□□□□ 0.72
Eri3Q8C460 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Eri3Q8C460 Gm45102-201ENSMUST00000207427 857 ntBASIC19.54■□□□□ 0.72
Eri3Q8C460 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Eri3Q8C460 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.53■□□□□ 0.72
Eri3Q8C460 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Eri3Q8C460 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Eri3Q8C460 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Eri3Q8C460 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Eri3Q8C460 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Eri3Q8C460 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Eri3Q8C460 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Eri3Q8C460 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Eri3Q8C460 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Eri3Q8C460 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Eri3Q8C460 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Eri3Q8C460 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Eri3Q8C460 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Eri3Q8C460 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Eri3Q8C460 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.52■□□□□ 0.72
Eri3Q8C460 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Eri3Q8C460 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Eri3Q8C460 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.51■□□□□ 0.71
Eri3Q8C460 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.51■□□□□ 0.71
Eri3Q8C460 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.51■□□□□ 0.71
Eri3Q8C460 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Eri3Q8C460 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.51■□□□□ 0.71
Eri3Q8C460 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Eri3Q8C460 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Eri3Q8C460 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Eri3Q8C460 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Eri3Q8C460 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.5■□□□□ 0.71
Eri3Q8C460 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Eri3Q8C460 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.5■□□□□ 0.71
Eri3Q8C460 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.5■□□□□ 0.71
Eri3Q8C460 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Eri3Q8C460 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Eri3Q8C460 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Eri3Q8C460 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Eri3Q8C460 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Eri3Q8C460 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Eri3Q8C460 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Eri3Q8C460 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.48■□□□□ 0.71
Eri3Q8C460 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Eri3Q8C460 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Eri3Q8C460 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Eri3Q8C460 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Eri3Q8C460 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Eri3Q8C460 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Eri3Q8C460 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Eri3Q8C460 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.47■□□□□ 0.71
Eri3Q8C460 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Eri3Q8C460 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.46■□□□□ 0.71
Eri3Q8C460 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Eri3Q8C460 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Eri3Q8C460 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Eri3Q8C460 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Eri3Q8C460 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Eri3Q8C460 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Eri3Q8C460 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Eri3Q8C460 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Eri3Q8C460 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Eri3Q8C460 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Eri3Q8C460 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Eri3Q8C460 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Eri3Q8C460 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 980.9 ms