Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.87■□□□□ 0.93
Usp43Q8BUM9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp43Q8BUM9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp43Q8BUM9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp43Q8BUM9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.85■□□□□ 0.93
Usp43Q8BUM9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp43Q8BUM9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp43Q8BUM9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp43Q8BUM9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp43Q8BUM9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp43Q8BUM9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Usp43Q8BUM9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Usp43Q8BUM9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp43Q8BUM9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp43Q8BUM9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp43Q8BUM9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp43Q8BUM9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp43Q8BUM9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp43Q8BUM9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp43Q8BUM9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp43Q8BUM9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Etf1-202ENSMUST00000180351 108 ntBASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp43Q8BUM9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp43Q8BUM9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp43Q8BUM9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp43Q8BUM9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp43Q8BUM9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp43Q8BUM9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp43Q8BUM9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp43Q8BUM9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp43Q8BUM9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp43Q8BUM9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp43Q8BUM9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms