Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sfr1Q8BP27 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sfr1Q8BP27 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sfr1Q8BP27 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.81■□□□□ 0.92
Sfr1Q8BP27 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.81■□□□□ 0.92
Sfr1Q8BP27 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sfr1Q8BP27 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sfr1Q8BP27 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sfr1Q8BP27 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sfr1Q8BP27 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sfr1Q8BP27 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sfr1Q8BP27 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.79■□□□□ 0.92
Sfr1Q8BP27 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.79■□□□□ 0.92
Sfr1Q8BP27 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Sfr1Q8BP27 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.79■□□□□ 0.92
Sfr1Q8BP27 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sfr1Q8BP27 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.78■□□□□ 0.92
Sfr1Q8BP27 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sfr1Q8BP27 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sfr1Q8BP27 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
Sfr1Q8BP27 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.77■□□□□ 0.92
Sfr1Q8BP27 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sfr1Q8BP27 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.77■□□□□ 0.92
Sfr1Q8BP27 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sfr1Q8BP27 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sfr1Q8BP27 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sfr1Q8BP27 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Sfr1Q8BP27 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sfr1Q8BP27 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sfr1Q8BP27 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sfr1Q8BP27 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sfr1Q8BP27 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sfr1Q8BP27 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.75■□□□□ 0.91
Sfr1Q8BP27 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sfr1Q8BP27 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sfr1Q8BP27 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.74■□□□□ 0.91
Sfr1Q8BP27 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sfr1Q8BP27 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sfr1Q8BP27 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Sfr1Q8BP27 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sfr1Q8BP27 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sfr1Q8BP27 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sfr1Q8BP27 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sfr1Q8BP27 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sfr1Q8BP27 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sfr1Q8BP27 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
Sfr1Q8BP27 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sfr1Q8BP27 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sfr1Q8BP27 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.71■□□□□ 0.91
Sfr1Q8BP27 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms