Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcmf1Q80UY2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcmf1Q80UY2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Kcmf1Q80UY2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.36■□□□□ 0.69
Kcmf1Q80UY2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kcmf1Q80UY2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.36■□□□□ 0.69
Kcmf1Q80UY2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Kcmf1Q80UY2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcmf1Q80UY2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcmf1Q80UY2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcmf1Q80UY2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcmf1Q80UY2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Kcmf1Q80UY2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.33■□□□□ 0.68
Kcmf1Q80UY2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kcmf1Q80UY2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Kcmf1Q80UY2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcmf1Q80UY2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcmf1Q80UY2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kcmf1Q80UY2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.32■□□□□ 0.68
Kcmf1Q80UY2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kcmf1Q80UY2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcmf1Q80UY2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcmf1Q80UY2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Kcmf1Q80UY2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
Kcmf1Q80UY2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.3■□□□□ 0.68
Kcmf1Q80UY2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kcmf1Q80UY2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kcmf1Q80UY2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcmf1Q80UY2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kcmf1Q80UY2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcmf1Q80UY2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcmf1Q80UY2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Kcmf1Q80UY2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcmf1Q80UY2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.25■□□□□ 0.67
Kcmf1Q80UY2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Kcmf1Q80UY2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kcmf1Q80UY2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Kcmf1Q80UY2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms