Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh19Q80TF3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh19Q80TF3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh19Q80TF3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdh19Q80TF3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh19Q80TF3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh19Q80TF3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh19Q80TF3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdh19Q80TF3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh19Q80TF3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh19Q80TF3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh19Q80TF3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh19Q80TF3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdh19Q80TF3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh19Q80TF3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.1■□□□□ 0.81
Pcdh19Q80TF3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh19Q80TF3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh19Q80TF3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh19Q80TF3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdh19Q80TF3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh19Q80TF3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh19Q80TF3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.09■□□□□ 0.81
Pcdh19Q80TF3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh19Q80TF3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Pcdh19Q80TF3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdh19Q80TF3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.08■□□□□ 0.81
Pcdh19Q80TF3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh19Q80TF3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.08■□□□□ 0.81
Pcdh19Q80TF3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh19Q80TF3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.08■□□□□ 0.8
Pcdh19Q80TF3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pcdh19Q80TF3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh19Q80TF3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms