Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptp4a1Q63739 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ptp4a1Q63739 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ptp4a1Q63739 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ptp4a1Q63739 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptp4a1Q63739 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptp4a1Q63739 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ptp4a1Q63739 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptp4a1Q63739 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptp4a1Q63739 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptp4a1Q63739 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.42■□□□□ 0.54
Ptp4a1Q63739 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptp4a1Q63739 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptp4a1Q63739 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptp4a1Q63739 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ptp4a1Q63739 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ptp4a1Q63739 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.39■□□□□ 0.53
Ptp4a1Q63739 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Gm5921-201ENSMUST00000075898 882 ntBASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptp4a1Q63739 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms