Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.1■□□□□ 0.17
Foxc2Q61850 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc2Q61850 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.09■□□□□ 0.17
Foxc2Q61850 Etf1-202ENSMUST00000180351 108 ntBASIC16.09■□□□□ 0.17
Foxc2Q61850 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Foxc2Q61850 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc2Q61850 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Foxc2Q61850 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Foxc2Q61850 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.08■□□□□ 0.16
Foxc2Q61850 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.08■□□□□ 0.16
Foxc2Q61850 Gm9959-201ENSMUST00000068277 390 ntBASIC16.08■□□□□ 0.16
Foxc2Q61850 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Foxc2Q61850 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Foxc2Q61850 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Foxc2Q61850 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc2Q61850 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc2Q61850 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxc2Q61850 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxc2Q61850 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc2Q61850 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc2Q61850 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.07■□□□□ 0.16
Foxc2Q61850 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc2Q61850 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
Foxc2Q61850 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxc2Q61850 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxc2Q61850 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc2Q61850 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc2Q61850 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc2Q61850 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc2Q61850 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc2Q61850 Gm14117-201ENSMUST00000122417 843 ntBASIC16.06■□□□□ 0.16
Foxc2Q61850 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.06■□□□□ 0.16
Foxc2Q61850 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc2Q61850 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc2Q61850 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.06■□□□□ 0.16
Foxc2Q61850 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Foxc2Q61850 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc2Q61850 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc2Q61850 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc2Q61850 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc2Q61850 Gm10399-202ENSMUST00000202768 748 ntBASIC16.05■□□□□ 0.16
Foxc2Q61850 Gm45102-201ENSMUST00000207427 857 ntBASIC16.05■□□□□ 0.16
Foxc2Q61850 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.05■□□□□ 0.16
Foxc2Q61850 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc2Q61850 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.04■□□□□ 0.16
Foxc2Q61850 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc2Q61850 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.04■□□□□ 0.16
Foxc2Q61850 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Foxc2Q61850 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc2Q61850 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Foxc2Q61850 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc2Q61850 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc2Q61850 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc2Q61850 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Foxc2Q61850 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc2Q61850 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Foxc2Q61850 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Foxc2Q61850 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc2Q61850 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc2Q61850 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxc2Q61850 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.02■□□□□ 0.16
Foxc2Q61850 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.02■□□□□ 0.16
Foxc2Q61850 Gm7417-201ENSMUST00000192950 473 ntBASIC16.02■□□□□ 0.16
Foxc2Q61850 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.02■□□□□ 0.16
Foxc2Q61850 Gm40881-201ENSMUST00000223397 166 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms