Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sox17Q61473 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.29■□□□□ 0.68
Sox17Q61473 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Sox17Q61473 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox17Q61473 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox17Q61473 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox17Q61473 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox17Q61473 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox17Q61473 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
Sox17Q61473 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox17Q61473 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox17Q61473 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox17Q61473 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox17Q61473 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sox17Q61473 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox17Q61473 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sox17Q61473 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox17Q61473 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox17Q61473 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox17Q61473 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Sox17Q61473 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox17Q61473 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox17Q61473 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox17Q61473 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.26■□□□□ 0.67
Sox17Q61473 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.26■□□□□ 0.67
Sox17Q61473 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox17Q61473 Gm9806-201ENSMUST00000051080 552 ntBASIC19.26■□□□□ 0.67
Sox17Q61473 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox17Q61473 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Sox17Q61473 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.25■□□□□ 0.67
Sox17Q61473 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.25■□□□□ 0.67
Sox17Q61473 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox17Q61473 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Sox17Q61473 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.24■□□□□ 0.67
Sox17Q61473 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox17Q61473 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sox17Q61473 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox17Q61473 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sox17Q61473 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox17Q61473 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox17Q61473 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sox17Q61473 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox17Q61473 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.22■□□□□ 0.67
Sox17Q61473 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sox17Q61473 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sox17Q61473 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox17Q61473 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox17Q61473 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sox17Q61473 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox17Q61473 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.21■□□□□ 0.67
Sox17Q61473 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sox17Q61473 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sox17Q61473 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox17Q61473 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox17Q61473 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.21■□□□□ 0.67
Sox17Q61473 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.2■□□□□ 0.66
Sox17Q61473 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox17Q61473 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox17Q61473 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox17Q61473 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox17Q61473 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.19■□□□□ 0.66
Sox17Q61473 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms