Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.82■□□□□ 0.92
Six4Q61321 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Six4Q61321 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.82■□□□□ 0.92
Six4Q61321 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Six4Q61321 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.81■□□□□ 0.92
Six4Q61321 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Six4Q61321 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Six4Q61321 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.81■□□□□ 0.92
Six4Q61321 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Six4Q61321 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six4Q61321 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six4Q61321 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
Six4Q61321 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six4Q61321 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
Six4Q61321 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.8■□□□□ 0.92
Six4Q61321 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Six4Q61321 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Six4Q61321 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.79■□□□□ 0.92
Six4Q61321 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six4Q61321 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Six4Q61321 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.79■□□□□ 0.92
Six4Q61321 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.79■□□□□ 0.92
Six4Q61321 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six4Q61321 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Gm7143-201ENSMUST00000222811 859 ntBASIC20.78■□□□□ 0.92
Six4Q61321 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.78■□□□□ 0.92
Six4Q61321 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six4Q61321 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.77■□□□□ 0.92
Six4Q61321 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Six4Q61321 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.77■□□□□ 0.92
Six4Q61321 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.77■□□□□ 0.92
Six4Q61321 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.77■□□□□ 0.92
Six4Q61321 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six4Q61321 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Six4Q61321 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Six4Q61321 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Six4Q61321 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.76■□□□□ 0.91
Six4Q61321 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six4Q61321 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six4Q61321 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Six4Q61321 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six4Q61321 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Six4Q61321 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Six4Q61321 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six4Q61321 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
Six4Q61321 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six4Q61321 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.75■□□□□ 0.91
Six4Q61321 Gm9870-201ENSMUST00000063874 645 ntBASIC20.75■□□□□ 0.91
Six4Q61321 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six4Q61321 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six4Q61321 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six4Q61321 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six4Q61321 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six4Q61321 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Six4Q61321 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six4Q61321 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six4Q61321 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six4Q61321 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Six4Q61321 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six4Q61321 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.73■□□□□ 0.91
Six4Q61321 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.73■□□□□ 0.91
Six4Q61321 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Six4Q61321 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six4Q61321 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six4Q61321 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six4Q61321 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Six4Q61321 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six4Q61321 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six4Q61321 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six4Q61321 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Six4Q61321 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Six4Q61321 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms