Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-1Q5R1I8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav3-1Q5R1I8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-1Q5R1I8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-1Q5R1I8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav3-1Q5R1I8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms