Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-4Q5R1I0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-4Q5R1I0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-4Q5R1I0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-4Q5R1I0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-4Q5R1I0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-4Q5R1I0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-4Q5R1I0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.27■□□□□ 0.35
Trav6d-4Q5R1I0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6d-4Q5R1I0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6d-4Q5R1I0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6d-4Q5R1I0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav6d-4Q5R1I0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-4Q5R1I0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-4Q5R1I0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-4Q5R1I0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-4Q5R1I0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.21■□□□□ 0.35
Trav6d-4Q5R1I0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6d-4Q5R1I0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-4Q5R1I0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms