Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.61■□□□□ 0.89
Zfp560Q3URI6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.6■□□□□ 0.89
Zfp560Q3URI6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp560Q3URI6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp560Q3URI6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.58■□□□□ 0.89
Zfp560Q3URI6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Zfp560Q3URI6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp560Q3URI6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Zfp560Q3URI6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp560Q3URI6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Zfp560Q3URI6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp560Q3URI6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp560Q3URI6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp560Q3URI6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Zfp560Q3URI6 Gm22238-201ENSMUST00000175222 88 ntBASIC20.55■□□□□ 0.88
Zfp560Q3URI6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Zfp560Q3URI6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp560Q3URI6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp560Q3URI6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.52■□□□□ 0.88
Zfp560Q3URI6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.52■□□□□ 0.88
Zfp560Q3URI6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Zfp560Q3URI6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp560Q3URI6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.52■□□□□ 0.88
Zfp560Q3URI6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.51■□□□□ 0.87
Zfp560Q3URI6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms