Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp30Q3UN04 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp30Q3UN04 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.69■□□□□ 0.9
Usp30Q3UN04 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp30Q3UN04 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.68■□□□□ 0.9
Usp30Q3UN04 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp30Q3UN04 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Usp30Q3UN04 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.67■□□□□ 0.9
Usp30Q3UN04 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Gm8493-201ENSMUST00000196881 489 ntBASIC20.66■□□□□ 0.9
Usp30Q3UN04 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.66■□□□□ 0.9
Usp30Q3UN04 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.66■□□□□ 0.9
Usp30Q3UN04 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp30Q3UN04 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp30Q3UN04 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp30Q3UN04 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Usp30Q3UN04 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp30Q3UN04 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp30Q3UN04 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Usp30Q3UN04 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp30Q3UN04 Gm43017-201ENSMUST00000198296 752 ntBASIC20.63■□□□□ 0.89
Usp30Q3UN04 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp30Q3UN04 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp30Q3UN04 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp30Q3UN04 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp30Q3UN04 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp30Q3UN04 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp30Q3UN04 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp30Q3UN04 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp30Q3UN04 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms