Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Naf1Q3UMQ8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.93■□□□□ 0.94
Naf1Q3UMQ8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Naf1Q3UMQ8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Naf1Q3UMQ8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Naf1Q3UMQ8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Naf1Q3UMQ8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Naf1Q3UMQ8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.91■□□□□ 0.94
Naf1Q3UMQ8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.91■□□□□ 0.94
Naf1Q3UMQ8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Naf1Q3UMQ8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Naf1Q3UMQ8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Naf1Q3UMQ8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Naf1Q3UMQ8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Naf1Q3UMQ8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Naf1Q3UMQ8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Naf1Q3UMQ8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Naf1Q3UMQ8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Naf1Q3UMQ8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Naf1Q3UMQ8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.88■□□□□ 0.93
Naf1Q3UMQ8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Naf1Q3UMQ8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Naf1Q3UMQ8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Naf1Q3UMQ8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Naf1Q3UMQ8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Naf1Q3UMQ8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Naf1Q3UMQ8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Naf1Q3UMQ8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Naf1Q3UMQ8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Naf1Q3UMQ8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Naf1Q3UMQ8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Naf1Q3UMQ8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Naf1Q3UMQ8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Naf1Q3UMQ8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.84■□□□□ 0.93
Naf1Q3UMQ8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Naf1Q3UMQ8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Naf1Q3UMQ8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Naf1Q3UMQ8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Naf1Q3UMQ8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Naf1Q3UMQ8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.83■□□□□ 0.93
Naf1Q3UMQ8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Naf1Q3UMQ8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Naf1Q3UMQ8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Naf1Q3UMQ8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.81■□□□□ 0.92
Naf1Q3UMQ8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms