Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.42■□□□□ 0.38
Cln6Q3U466 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Cln6Q3U466 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cln6Q3U466 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cln6Q3U466 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cln6Q3U466 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln6Q3U466 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.41■□□□□ 0.38
Cln6Q3U466 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln6Q3U466 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Cln6Q3U466 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cln6Q3U466 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.41■□□□□ 0.38
Cln6Q3U466 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln6Q3U466 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.4■□□□□ 0.38
Cln6Q3U466 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln6Q3U466 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln6Q3U466 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.4■□□□□ 0.38
Cln6Q3U466 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln6Q3U466 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Cln6Q3U466 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cln6Q3U466 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.39■□□□□ 0.37
Cln6Q3U466 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.39■□□□□ 0.37
Cln6Q3U466 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cln6Q3U466 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.39■□□□□ 0.37
Cln6Q3U466 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cln6Q3U466 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cln6Q3U466 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cln6Q3U466 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cln6Q3U466 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.38■□□□□ 0.37
Cln6Q3U466 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cln6Q3U466 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cln6Q3U466 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cln6Q3U466 Gm7332-201ENSMUST00000118351 454 ntBASIC17.38■□□□□ 0.37
Cln6Q3U466 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.38■□□□□ 0.37
Cln6Q3U466 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cln6Q3U466 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.38■□□□□ 0.37
Cln6Q3U466 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cln6Q3U466 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cln6Q3U466 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cln6Q3U466 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Cln6Q3U466 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.37■□□□□ 0.37
Cln6Q3U466 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.37■□□□□ 0.37
Cln6Q3U466 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.37■□□□□ 0.37
Cln6Q3U466 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cln6Q3U466 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cln6Q3U466 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cln6Q3U466 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.36■□□□□ 0.37
Cln6Q3U466 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.36■□□□□ 0.37
Cln6Q3U466 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.36■□□□□ 0.37
Cln6Q3U466 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.36■□□□□ 0.37
Cln6Q3U466 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cln6Q3U466 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cln6Q3U466 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cln6Q3U466 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Cln6Q3U466 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.35■□□□□ 0.37
Cln6Q3U466 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.35■□□□□ 0.37
Cln6Q3U466 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.35■□□□□ 0.37
Cln6Q3U466 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cln6Q3U466 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln6Q3U466 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cln6Q3U466 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Cln6Q3U466 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cln6Q3U466 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cln6Q3U466 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.34■□□□□ 0.37
Cln6Q3U466 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cln6Q3U466 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cln6Q3U466 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln6Q3U466 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cln6Q3U466 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cln6Q3U466 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.33■□□□□ 0.37
Cln6Q3U466 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cln6Q3U466 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cln6Q3U466 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 255.5 ms