Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.91■■□□□ 1.1
Nhej1Q3KNJ2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nhej1Q3KNJ2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.89■■□□□ 1.1
Nhej1Q3KNJ2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nhej1Q3KNJ2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Mir6538-201ENSMUST00000183713 110 ntBASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nhej1Q3KNJ2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nhej1Q3KNJ2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nhej1Q3KNJ2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nhej1Q3KNJ2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nhej1Q3KNJ2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nhej1Q3KNJ2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.86■■□□□ 1.09
Nhej1Q3KNJ2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nhej1Q3KNJ2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nhej1Q3KNJ2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.85■■□□□ 1.09
Nhej1Q3KNJ2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Nhej1Q3KNJ2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Nhej1Q3KNJ2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nhej1Q3KNJ2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nhej1Q3KNJ2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nhej1Q3KNJ2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nhej1Q3KNJ2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nhej1Q3KNJ2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nhej1Q3KNJ2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nhej1Q3KNJ2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nhej1Q3KNJ2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nhej1Q3KNJ2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nhej1Q3KNJ2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nhej1Q3KNJ2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nhej1Q3KNJ2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.08
Nhej1Q3KNJ2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nhej1Q3KNJ2 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.81■■□□□ 1.08
Nhej1Q3KNJ2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nhej1Q3KNJ2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nhej1Q3KNJ2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms