Protein–RNA interactions for Protein: P97784

Cry1, Cryptochrome-1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry1P97784 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cry1P97784 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cry1P97784 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.72■□□□□ 0.91
Cry1P97784 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.72■□□□□ 0.91
Cry1P97784 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cry1P97784 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cry1P97784 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cry1P97784 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Cry1P97784 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cry1P97784 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.71■□□□□ 0.91
Cry1P97784 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cry1P97784 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cry1P97784 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cry1P97784 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cry1P97784 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cry1P97784 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cry1P97784 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Cry1P97784 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.71■□□□□ 0.91
Cry1P97784 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cry1P97784 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cry1P97784 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cry1P97784 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cry1P97784 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cry1P97784 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cry1P97784 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cry1P97784 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Cry1P97784 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cry1P97784 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.7■□□□□ 0.9
Cry1P97784 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cry1P97784 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
Cry1P97784 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cry1P97784 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cry1P97784 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Cry1P97784 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Cry1P97784 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cry1P97784 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.68■□□□□ 0.9
Cry1P97784 Gm43017-201ENSMUST00000198296 752 ntBASIC20.68■□□□□ 0.9
Cry1P97784 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.68■□□□□ 0.9
Cry1P97784 Gm7143-201ENSMUST00000222811 859 ntBASIC20.68■□□□□ 0.9
Cry1P97784 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cry1P97784 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.67■□□□□ 0.9
Cry1P97784 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.67■□□□□ 0.9
Cry1P97784 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.67■□□□□ 0.9
Cry1P97784 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cry1P97784 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
Cry1P97784 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cry1P97784 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cry1P97784 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cry1P97784 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.66■□□□□ 0.9
Cry1P97784 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cry1P97784 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Cry1P97784 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cry1P97784 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cry1P97784 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cry1P97784 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.65■□□□□ 0.9
Cry1P97784 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Gm8493-201ENSMUST00000196881 489 ntBASIC20.65■□□□□ 0.9
Cry1P97784 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cry1P97784 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cry1P97784 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Cry1P97784 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cry1P97784 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.65■□□□□ 0.9
Cry1P97784 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.64■□□□□ 0.89
Cry1P97784 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.64■□□□□ 0.89
Cry1P97784 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.64■□□□□ 0.89
Cry1P97784 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.64■□□□□ 0.89
Cry1P97784 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cry1P97784 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cry1P97784 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cry1P97784 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cry1P97784 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cry1P97784 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cry1P97784 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Cry1P97784 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cry1P97784 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cry1P97784 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cry1P97784 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Cry1P97784 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms