Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cks1bP61025 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cks1bP61025 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cks1bP61025 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.5□□□□□ -0.09
Cks1bP61025 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cks1bP61025 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1bP61025 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cks1bP61025 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.49□□□□□ -0.09
Cks1bP61025 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.49□□□□□ -0.09
Cks1bP61025 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1bP61025 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cks1bP61025 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cks1bP61025 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cks1bP61025 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.48□□□□□ -0.09
Cks1bP61025 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1bP61025 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
Cks1bP61025 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cks1bP61025 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cks1bP61025 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.47□□□□□ -0.09
Cks1bP61025 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cks1bP61025 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1bP61025 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Cks1bP61025 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1bP61025 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1bP61025 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1bP61025 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cks1bP61025 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1bP61025 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cks1bP61025 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cks1bP61025 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.46□□□□□ -0.09
Cks1bP61025 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1bP61025 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1bP61025 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1bP61025 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1bP61025 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cks1bP61025 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1bP61025 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Cks1bP61025 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Cks1bP61025 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cks1bP61025 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1bP61025 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cks1bP61025 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1bP61025 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1bP61025 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cks1bP61025 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1bP61025 Gm7432-201ENSMUST00000210343 879 ntBASIC14.44□□□□□ -0.1
Cks1bP61025 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1bP61025 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cks1bP61025 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1bP61025 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1bP61025 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms