Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hmgcs2P54869 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Hmgcs2P54869 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Hmgcs2P54869 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Hmgcs2P54869 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hmgcs2P54869 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hmgcs2P54869 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.12■■□□□ 1.29
Hmgcs2P54869 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.11■■□□□ 1.29
Hmgcs2P54869 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs2P54869 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.11■■□□□ 1.29
Hmgcs2P54869 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs2P54869 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Spcs1-204ENSMUST00000226782 949 ntBASIC23.1■■□□□ 1.29
Hmgcs2P54869 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs2P54869 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs2P54869 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.09■■□□□ 1.29
Hmgcs2P54869 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs2P54869 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs2P54869 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs2P54869 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs2P54869 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.08■■□□□ 1.29
Hmgcs2P54869 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Hmgcs2P54869 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs2P54869 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Hmgcs2P54869 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Hmgcs2P54869 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Hmgcs2P54869 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.07■■□□□ 1.28
Hmgcs2P54869 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Hmgcs2P54869 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Hmgcs2P54869 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hmgcs2P54869 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs2P54869 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs2P54869 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs2P54869 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs2P54869 Gm26833-201ENSMUST00000180899 440 ntBASIC23.06■■□□□ 1.28
Hmgcs2P54869 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs2P54869 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hmgcs2P54869 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Hmgcs2P54869 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hmgcs2P54869 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs2P54869 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.04■■□□□ 1.28
Hmgcs2P54869 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs2P54869 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.04■■□□□ 1.28
Hmgcs2P54869 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.04■■□□□ 1.28
Hmgcs2P54869 Gm29257-201ENSMUST00000186115 639 ntBASIC23.04■■□□□ 1.28
Hmgcs2P54869 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs2P54869 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Hmgcs2P54869 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.04■■□□□ 1.28
Hmgcs2P54869 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.03■■□□□ 1.28
Hmgcs2P54869 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Hmgcs2P54869 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.03■■□□□ 1.28
Hmgcs2P54869 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hmgcs2P54869 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.02■■□□□ 1.28
Hmgcs2P54869 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hmgcs2P54869 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hmgcs2P54869 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hmgcs2P54869 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.01■■□□□ 1.27
Hmgcs2P54869 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.01■■□□□ 1.27
Hmgcs2P54869 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs2P54869 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs2P54869 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs2P54869 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hmgcs2P54869 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Hmgcs2P54869 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hmgcs2P54869 Gm43060-201ENSMUST00000200621 289 ntBASIC23■■□□□ 1.27
Hmgcs2P54869 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Hmgcs2P54869 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Hmgcs2P54869 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs2P54869 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms