Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Krt6aP50446 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Krt6aP50446 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt6aP50446 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt6aP50446 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Mir6538-201ENSMUST00000183713 110 ntBASIC20.36■□□□□ 0.85
Krt6aP50446 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.36■□□□□ 0.85
Krt6aP50446 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Krt6aP50446 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.36■□□□□ 0.85
Krt6aP50446 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Krt6aP50446 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Krt6aP50446 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.35■□□□□ 0.85
Krt6aP50446 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.35■□□□□ 0.85
Krt6aP50446 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.35■□□□□ 0.85
Krt6aP50446 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Krt6aP50446 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt6aP50446 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Krt6aP50446 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt6aP50446 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.34■□□□□ 0.85
Krt6aP50446 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt6aP50446 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt6aP50446 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt6aP50446 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt6aP50446 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt6aP50446 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt6aP50446 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.34■□□□□ 0.85
Krt6aP50446 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt6aP50446 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt6aP50446 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Krt6aP50446 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt6aP50446 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Krt6aP50446 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Krt6aP50446 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt6aP50446 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Krt6aP50446 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt6aP50446 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt6aP50446 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt6aP50446 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Krt6aP50446 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt6aP50446 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Krt6aP50446 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.33■□□□□ 0.84
Krt6aP50446 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.32■□□□□ 0.84
Krt6aP50446 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt6aP50446 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
Krt6aP50446 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Krt6aP50446 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt6aP50446 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt6aP50446 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt6aP50446 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt6aP50446 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt6aP50446 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Krt6aP50446 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.31■□□□□ 0.84
Krt6aP50446 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.3■□□□□ 0.84
Krt6aP50446 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Krt6aP50446 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Krt6aP50446 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt6aP50446 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt6aP50446 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt6aP50446 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt6aP50446 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt6aP50446 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Krt6aP50446 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Krt6aP50446 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Krt6aP50446 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt6aP50446 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt6aP50446 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms