Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rph3aP47708 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rph3aP47708 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rph3aP47708 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.75■□□□□ 0.75
Rph3aP47708 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.75■□□□□ 0.75
Rph3aP47708 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.75■□□□□ 0.75
Rph3aP47708 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rph3aP47708 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rph3aP47708 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rph3aP47708 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rph3aP47708 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.75■□□□□ 0.75
Rph3aP47708 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.74■□□□□ 0.75
Rph3aP47708 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.74■□□□□ 0.75
Rph3aP47708 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3aP47708 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rph3aP47708 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rph3aP47708 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.73■□□□□ 0.75
Rph3aP47708 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rph3aP47708 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Rph3aP47708 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.73■□□□□ 0.75
Rph3aP47708 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rph3aP47708 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rph3aP47708 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rph3aP47708 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rph3aP47708 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rph3aP47708 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rph3aP47708 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rph3aP47708 Etf1-202ENSMUST00000180351 108 ntBASIC19.71■□□□□ 0.75
Rph3aP47708 Gm7417-201ENSMUST00000192950 473 ntBASIC19.71■□□□□ 0.75
Rph3aP47708 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.71■□□□□ 0.75
Rph3aP47708 Gm9959-201ENSMUST00000068277 390 ntBASIC19.71■□□□□ 0.75
Rph3aP47708 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rph3aP47708 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Rph3aP47708 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rph3aP47708 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rph3aP47708 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rph3aP47708 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rph3aP47708 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rph3aP47708 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.7■□□□□ 0.74
Rph3aP47708 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rph3aP47708 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rph3aP47708 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rph3aP47708 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rph3aP47708 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3aP47708 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3aP47708 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.68■□□□□ 0.74
Rph3aP47708 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3aP47708 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.68■□□□□ 0.74
Rph3aP47708 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3aP47708 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3aP47708 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3aP47708 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rph3aP47708 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.67■□□□□ 0.74
Rph3aP47708 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.67■□□□□ 0.74
Rph3aP47708 Gm45102-201ENSMUST00000207427 857 ntBASIC19.67■□□□□ 0.74
Rph3aP47708 Rps24-207ENSMUST00000224568 714 ntBASIC19.67■□□□□ 0.74
Rph3aP47708 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.67■□□□□ 0.74
Rph3aP47708 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rph3aP47708 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rph3aP47708 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rph3aP47708 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rph3aP47708 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rph3aP47708 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rph3aP47708 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Rph3aP47708 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.66■□□□□ 0.74
Rph3aP47708 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.66■□□□□ 0.74
Rph3aP47708 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rph3aP47708 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.66■□□□□ 0.74
Rph3aP47708 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3aP47708 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3aP47708 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3aP47708 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3aP47708 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3aP47708 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3aP47708 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3aP47708 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.65■□□□□ 0.74
Rph3aP47708 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rph3aP47708 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rph3aP47708 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rph3aP47708 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rph3aP47708 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.64■□□□□ 0.73
Rph3aP47708 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms